ncRNA ID | novel_bra_miR138 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA1:11006025-11006143 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485289 |
Length | 24 |
Mature sequence(if miRNA) | 96 - AGCGGAAUAUAAGAAUCUGUCUCU - 119 |
Stem-loop(if miRNA) |
--    G           C     C       G           U       C  GUUUU   AGCG AAUAUAAGAAU UGUCU UUAAUUU UAACUAAAAAA CUAAGAA CG     U   |||| ||||||||||| ||||| ||||||| ||||||||||| ||||||| ||   UUGC UUAUAUUCUUG GCAGA AAUUGAA AUUGAUUUUUU GAUUCUU GC     A AA    A           U     A       A           -       A  AAUAA |
Stem-loop sequence | AGCGGAAUAUAAGAAUCUGUCUCUUAAUUUGUAACUAAAAAAUCUAAGAACCGGUUUUUAAAUAACGAUUCUUAGUUUUUUAGUUAAAAGUUAAAAGACGUGUUCUUAUAUUACGUUAA |