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BaseInfo

ncRNA ID novel_bra_miR138
Species Brassica rapa
Class miRNA
Genome position ChrA1:11006025-11006143 [-]
Reference genome Brapa_1.0
Source SRR1485289
Length 24
Mature sequence(if miRNA) 96 - AGCGGAAUAUAAGAAUCUGUCUCU - 119
Stem-loop(if miRNA) --    G           C     C       G           U       C  GUUUU
  AGCG AAUAUAAGAAU UGUCU UUAAUUU UAACUAAAAAA CUAAGAA CG     U
  |||| ||||||||||| ||||| ||||||| ||||||||||| ||||||| ||
  UUGC UUAUAUUCUUG GCAGA AAUUGAA AUUGAUUUUUU GAUUCUU GC     A
AA    A           U     A       A           -       A  AAUAA
Stem-loop sequence AGCGGAAUAUAAGAAUCUGUCUCUUAAUUUGUAACUAAAAAAUCUAAGAACCGGUUUUUAAAUAACGAUUCUUAGUUUUUUAGUUAAAAGUUAAAAGACGUGUUCUUAUAUUACGUUAA