Search result

BaseInfo

ncRNA ID novel_bra_miR132
Species Brassica rapa
Class miRNA
Genome position ChrA2:2048909-2048998 [-]
Reference genome Brapa_1.0
Source SRR1160826;SRR1592475;SRR1592477;SRR1125021
Length 24
Mature sequence(if miRNA) 1 - AAUAUUAAUAUAGUUGGUGAGAGA - 24
Stem-loop(if miRNA) -                                 A        A
 UUCUUACCAAUUAUAUUAAUAUUUAAUUGGAGA UUUCUCAG A
 ||||||||||||||||||||||||||||||||| |||||||| A
 GAGAGUGGUUGAUAUAAUUAUAAAUUAGCUUUU AGAGAGUC A
A                                 C        G
Stem-loop sequence UUCUUACCAAUUAUAUUAAUAUUUAAUUGGAGAAUUUCUCAGAAAAGCUGAGAGACUUUUCGAUUAAAUAUUAAUAUAGUUGGUGAGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009132470.2
ncRNA:24   AG-AG-AGUGGUUGAUAUAAUUAUAA   1
  ||-||-||||===|||||||||||||
targets:1350   UCAUCAUCACUGGCUAUAUUAAUAUU   1375

3.0 PREDICTED: Brassica rapa uncharacterized LOC103855480 (LOC103855480), mRNA uncharacterized LOC103855480(LOC103855480) coding protein psRNATarget