ncRNA ID | novel_bra_miR130 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:2636507-2636617 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485288 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUAUGUCAGUUAAUGUUUUCGCC - 24 |
Stem-loop(if miRNA) |
--        A             -  A    AUA  A    U    A  A UU  U   UUUAUGUC GUUAAUGUUUUCG CC UUCC   AC UUUG CGUU AC G  AA G   |||||||| ||||||||||||| || ||||   || |||| |||| || |  ||   AAAUACAG CAAUUACAAAAGC GG GAGG   UG AAAC GCAA UG C  UU U AG        A             A  -    CAC  G    U    C  - CU  U |
Stem-loop sequence | UUUAUGUCAGUUAAUGUUUUCGCCAUUCCAUAACAUUUGUCGUUAACAGUUAAUGUUUUUCCGUCAACGUCAAAGGUCACGGAGGGACGAAAACAUUAACAGACAUAAAGA |