| ncRNA ID | novel_bra_miR128 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA2:2630733-2630838 [-] |
| Reference genome | Brapa_1.0 |
| Source | SRR1160826;SRR1161445;SRR1776880 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - UCGAUAAACCUCUGCAUCCAG - 21 |
| Stem-loop(if miRNA) |
-- G C C C C ---G UG UUGUU GGA GCAG GGUU AUCGAUCU UUC UGU GAUUUUUUUU G U ||| |||| |||| |||||||| ||| ||| |||||||||| | G CCU CGUC CCAA UAGCUAGA AAG ACG UUAGAGAAAG U U GA A U A C U AAAA GU GUUGU |
| Stem-loop sequence | GGAGGCAGCGGUUCAUCGAUCUCUUCCUGUGGAUUUUUUUUUGGUUGUUUGUUGUUGUUGGAAAGAGAUUAAAAGCAUGAACAGAUCGAUAAACCUCUGCAUCCAG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009121414.2 |
|
3.0 | PREDICTED: Brassica rapa endoribonuclease Dicer homolog 1 (LOC103844613), mRNA | endoribonuclease Dicer homolog 1(LOC103844613) | coding protein | psRNATarget | |||||||||
| XM_009150837.2 |
|
3.0 | PREDICTED: Brassica rapa auxin-responsive protein SAUR41 (LOC103872443), mRNA | auxin-responsive protein SAUR41(LOC103872443) | coding protein | psRNATarget |