ncRNA ID | novel_bra_miR127 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA4:18261436-18261555 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485288;SRR1485289;SRR1776796;SRR1161445;SRR1776880;SRR1776889;SRR1776899;SRR1777714;SRR1485260;SRR1485261;SRR1485262;SRR1485263;SRR1485264;SRR1485265;SRR1485268;SRR1160826;SRR1485269;SRR1485270;SRR1485271;SRR1485272;SRR1485273;SRR1485276;SRR1485277 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CCAGUAGUUCGUUAGGUUUGAC - 22 |
Stem-loop(if miRNA) |
--C     GU     A         C            ------    GUUCUUGAUCUUGUG    CAGUA  UCGUU GGUUUGACC AAAUCUGGUCCU      GAUU               U    |||||  ||||| ||||||||| ||||||||||||      ||||    GUCAU  AGUAA CCGAACUGG UUUAGGCCAGGA      CAGU               C CUA     AU     C         U            CCGAUG    AUAAAGUAAGUGUGU |
Stem-loop sequence | CCAGUAGUUCGUUAGGUUUGACCCAAAUCUGGUCCUGAUUGUUCUUGAUCUUGUGUCUGUGUGAAUGAAAUAUGACGUAGCCAGGACCGGAUUUUGGUCAAGCCCAAUGAUAUACUGAUC |