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BaseInfo

ncRNA ID novel_bra_miR127
Species Brassica rapa
Class miRNA
Genome position ChrA4:18261436-18261555 [+]
Reference genome Brapa_1.0
Source SRR1485288;SRR1485289;SRR1776796;SRR1161445;SRR1776880;SRR1776889;SRR1776899;SRR1777714;SRR1485260;SRR1485261;SRR1485262;SRR1485263;SRR1485264;SRR1485265;SRR1485268;SRR1160826;SRR1485269;SRR1485270;SRR1485271;SRR1485272;SRR1485273;SRR1485276;SRR1485277
Length 22
Mature sequence(if miRNA) 1 - CCAGUAGUUCGUUAGGUUUGAC - 22
Stem-loop(if miRNA) --C     GU     A         C            ------    GUUCUUGAUCUUGUG
   CAGUA  UCGUU GGUUUGACC AAAUCUGGUCCU      GAUU               U
   |||||  ||||| ||||||||| ||||||||||||      ||||
   GUCAU  AGUAA CCGAACUGG UUUAGGCCAGGA      CAGU               C
CUA     AU     C         U            CCGAUG    AUAAAGUAAGUGUGU
Stem-loop sequence CCAGUAGUUCGUUAGGUUUGACCCAAAUCUGGUCCUGAUUGUUCUUGAUCUUGUGUCUGUGUGAAUGAAAUAUGACGUAGCCAGGACCGGAUUUUGGUCAAGCCCAAUGAUAUACUGAUC