ncRNA ID | novel_bra_miR124 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA3:2125852-2125984 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485288 |
Length | 24 |
Mature sequence(if miRNA) | 110 - AUAGAAUACCAUUGGAGCAAACUC - 133 |
Stem-loop(if miRNA) |
--GAA             C       CUCAUUUUAUAA                  -UACUC    UAU   G      UGCUCCAAUGGUA UCUAUUU            UAGAGUAGAAAAUAGAUU      CAAA   AAA U      ||||||||||||| |||||||            ||||||||||||||||||      ||||   |||      ACGAGGUUACCAU AGAUAAA            AUCUCAUUUUUUAUCUGA      GUUU   UUU A CUCAA             A       ------------                  CUACUU    UUU   A |
Stem-loop sequence | GAAUGCUCCAAUGGUACUCUAUUUCUCAUUUUAUAAUAGAGUAGAAAAUAGAUUUACUCCAAAUAUAAAGUAAUUUUUUUUUGUUCAUCAGUCUAUUUUUUACUCUAAAAUAGAAUACCAUUGGAGCAAACUC |