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BaseInfo

ncRNA ID novel_bra_miR122
Species Brassica rapa
Class miRNA
Genome position ChrA2:11549305-11549386 [+]
Reference genome Brapa_1.0
Source SRR1485288;SRR1485258;SRR1485259;SRR1485260
Length 24
Mature sequence(if miRNA) 1 - AGCAAUAUAUAAGAUGGAUGGGCC - 24
Stem-loop(if miRNA) --A  A    A    A         CAC    -         A
   GC AUAU UAAG UGGAUGGGC   UCCA CUUAGAACC A
   || |||| |||| |||||||||   |||| |||||||||
   UG UAUA AUUC AUCUACCCG   AGGU GGAUUUUGG U
CUA  G    -    G         --A    U         U
Stem-loop sequence AGCAAUAUAUAAGAUGGAUGGGCCACUCCACUUAGAACCAAUUGGUUUUAGGUUGGAAGCCCAUCUAGCUUAAUAUGGUAUC