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BaseInfo

ncRNA ID novel_bra_miR121
Species Brassica rapa
Class miRNA
Genome position ChrA2:3170539-3170724 [-]
Reference genome Brapa_1.0
Source SRR1160826
Length 22
Mature sequence(if miRNA) 165 - UAGAUUUGCUCCAAUGGUUCAC - 186
Stem-loop(if miRNA) --                                                             AUAU   UGUUUUUUCACUCUAUAUUUGGAG
  UAGAUUUGCUCCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGA    UCU                        U
  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||                        A
  AUCUAAACGAGGUUACCAAGUGAGAUAUUAUCUCAAUGAGAUAUUAUCUCACUUUAUAUCU    UGA                        A
CA                                                             ---C   CUUUAUAUCUCAUUAGAAUAAAAA
Stem-loop sequence UAGAUUUGCUCCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAAUAUUCUUGUUUUUUCACUCUAUAUUUGGAGUAAAAAAAUAAGAUUACUCUAUAUUUCAGUCUCUAUAUUUCACUCUAUUAUAGAGUAACUCUAUUAUAGAGUGAACCAUUGGAGCAAAUCUAAC