ncRNA ID | novel_bra_miR119 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA10:1976675-1976838 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485288 |
Length | 23 |
Mature sequence(if miRNA) | 142 - AUGUUCCAAUGUAUGACUCUAUA - 164 |
Stem-loop(if miRNA) |
--               A                        --U   AAAA            AAA    CU   U  A    C   AUGUUCCAAUGUAUG CUCUAUAAUAGAGUUCCUCUAUUU   AGA    AAAAUAUAGAGG   GUUA  UUU CC UCUA A   ||||||||||||||| ||||||||||||||||||||||||   |||    ||||||||||||   ||||  ||| || ||||   UACGAGGUUACAUAC GAGAUAUUAUCUCAAGGAGAUAAA   UCU    UUUUAUAUCUCU   CGAU  AAG GG AGAU U UU               G                        UAU   ---C            AUA    AU   U  -    U |
Stem-loop sequence | AUGUUCCAAUGUAUGACUCUAUAAUAGAGUUCCUCUAUUUUAGAAAAAAAAAUAUAGAGGAAAGUUACUUUUUCCAUCUACAUUUAGAGGUGAAUAUAGCAUAUCUCUAUAUUUUCUCUUAUAAAUAGAGGAACUCUAUUAUAGAGGCAUACAUUGGAGCAUUU |