ncRNA ID | novel_bra_miR118 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA2:8681960-8682079 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1160826 |
Length | 24 |
Mature sequence(if miRNA) | 97 - AAACCCUUGGGUAAACCCUGAACC - 120 |
Stem-loop(if miRNA) |
-- A G AAUCAAAAAUAU AAACCCUUGGGUAAACCCUGAACCCUUGGAUAAAUCAUAA CU UA U |||||||||||||||||||||||||||||||||||||||| || || UUUGGGAACCUAUUUGGGACUUGGGAACCUAUUUAGUAUU GA AU U GA A G CUCAAAUUAAAA |
Stem-loop sequence | AAACCCUUGGGUAAACCCUGAACCCUUGGAUAAAUCAUAAACUGUAAAUCAAAAAUAUUUAAAAUUAAACUCUAGAGAUUAUGAUUUAUCCAAGGGUUCAGGGUUUAUCCAAGGGUUUAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009149586.2 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC103871342 (LOC103871342), mRNA | uncharacterized LOC103871342(LOC103871342) | coding protein | psRNATarget |