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BaseInfo

ncRNA ID	novel_bra_miR116
Species	Brassica rapa
Class	miRNA
Genome position	ChrA8:11336680-11336758 [+]
Reference genome	Brapa_1.0
Source	SRR1485288;SRR1592475;SRR1592476;SRR1776796;SRR1776877;SRR1776889;SRR1776899;SRR1777714;SRR2912891;SRR2912893;SRR1485262;SRR1485265;SRR1485269;SRR1485270
Length	21
Mature sequence(if miRNA)	59 - GCAAGUUGACUUUGGCUCUGU - 79
Stem-loop(if miRNA)	--U         A           UUUUUU   AC     UA    GAGCCAAGG UGACUUGCCGA      CCA  GAAUC  U    ||||||||| |||||||||||      |||  |||||    CUCGGUUUC GUUGAACGGUU      GGU  UUUAG  A UGU         A           ---UGU   --     UC
Stem-loop sequence	UGAGCCAAGGAUGACUUGCCGAUUUUUUCCAACGAAUCUAUACUGAUUUUGGUGUUUGGCAAGUUGACUUUGGCUCUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009133210.2	ncRNA:21   UGUCUCGGUUUCAGUUGAACG   1   |*||||*||||*||||||||| targets:385   AAAGAGGCAAAUUCAACUUGC   405 Target Full Sequence	2.5	PREDICTED: Brassica rapa myb-related protein Hv1-like (LOC103856130), mRNA	myb-related protein Hv1-like(LOC103856130)	coding protein	psRNATarget
XM_009123336.2	ncRNA:21   UGUCUCGGUUUCAGUUGAACG   1   |*||||*||||*||||||||| targets:462   AAAGAGGCAAAUUCAACUUGC   482 Target Full Sequence	2.5	PREDICTED: Brassica rapa myb-related protein Hv1 (LOC103846421), mRNA	myb-related protein Hv1(LOC103846421)	coding protein	psRNATarget
XM_009127796.2	ncRNA:21   UGUCUCGGUUUCAGUUGAACG   1   |*||||*||||*||||||||| targets:622   AAAGAGGCAAAUUCAACUUGC   642 Target Full Sequence	2.5	PREDICTED: Brassica rapa transcription factor MYB34-like (LOC103850980), mRNA	transcription factor MYB34-like(LOC103850980)	coding protein	psRNATarget