Search result

BaseInfo

ncRNA ID	ath_circ_000338
Species	Arabidopsis thaliana
Class	circRNA
Genome position	1:1067763-1070494[-]
Reference genome	TAIR10
Source	PlantcircBase
Method	NA
Type	exonic
Splice junction sequence	CAATATTAGATCAGCTGCAGGGAGAAACTCAACTTGATGCGTTACAAAAACCACAGTTTTCTCAGCCAATGCAGATAGAATATAATCCTGTATAGCCATTATGATCGGGAAAGATTTGTGATAGAGAGTTTGTTTAAAATCAACAACCGGCGGATTGTTCGAGATAGAACAAGCATCTCACCACATCCCAAAGCTCGTAG
Tissues	root, whole_plant
Exon boundary	Yes-Yes
Splicing signals	AC-CT
circRNA sequence	NA
Genomic sequence	CAATATTAGATCAGCTGCAGGGAGAAACTCAACTTGATGCGTTACAAAAACCACAGTTTTCTCAGCCAATGCAGATAGAATATAATCCTGTATAGCCATTAATAACCGTGTTACGCAAACGTTCAAACTCAAAATATGAAAACATGACTTGAATAGCTTCTTACCCTAAACAAATCAGAGCCAGTGTGTGCATCAAGAGCACTAAAAGGGTCGTCTAGTAAATAAATGTCAGCATCTTGATATAATGCCCTTGCAAGTTGTACACGCTGTTTCTGACCTCCGCTGAGATTTATACCTCTCTCCCCGATAATAGTTTGGTCCCCATGTGAGAAAAGCTCTATATCTTTCTTTAGGGAACATGCTTGTATCACATTCTTGTACTTTGTTTTCTCCATTGGACTGCCAAATAGAATGTTTTCTTCAATGTTACCAGACTGAATCCAAGCCGATTGAGACACATAACCAGTAGTACCACATATTCTAACCTATATAACAATTATCAGCAGTTGGATCAATGATAGCTAAGTGAATATAAGAAAAGAAAAGAAAAAATAGTGAAGCAATTGAGACAAACACCCCAAAACATTAACTTACTTCGCCAGAGATTTTTGGGATTTCCCCTAGGATGCAAGAGATAAAACTTGATTTTCCAGAGCCAACTGTGCCACAGACAGCCACACGCATACCCTTCTCCACTTTCATCTGAATCCCAGATAATGTCGGCCTTGAAGAAAAAGGGTCCCAACAAAACACACCATCTTTAATCTCTATGGCTATATTCGAAAGTCCCCGTGGAATAACAACAGTTGCATCTTCTTGAAGTTCTTCCTCCTGCAAGAACCCAGAAATCCTATCAAGAGAAACCTTTGTCTGAGCCATCATTGAAACCAGATCAGGAAAGTTCCGAAGTGGCTCCTGAAGAATTCTGAATGTCGCCAGAGCAGAAAGAACACCTCCAGCGGTAAGTTGAGTGCCTAGAAATATCGAAGTAGCGAATGTAACTGCGGCGACAAAAATGGGGGAACTCCAAAAGATAAAAGTAACAAAAGCCTGAGAATATAAGGCTTTGCGAAGCCAACCATACTCCTCTTCCCTCATTTCTTCCAATCTCACTCTATAACGATCTTCCCATGCCTGCAATTTCAGAACTCTCATGTTCCTAAGACACTCTGAGGTTTTCCTCATTCTTTCATCTTTCGCAGTCATCAACTTATCTTGATAGTCTTCCTGGACCTTAGCGAGTGGAATCGTGACAAGAATCGAGATTATTGTAGCAACCAATGTAGCTACAGCAGCTATGCCCACGCTTTTATATAGGATTGCAAGAGCAAGAACTATTTGCATCGGAAGCATCCAAATATCATGAAGATACCATGAGTAATCTCCTATGCGCTGGACATCGACTGCCATGTAGTTTACAATTTCACCGCTCGTGTGGTTCTGCTTGGCTATACTTGAAAGTTTGAGACCTTTTCGGTATACCATTGCTGTAAGAGCTGATCTAACATGCATCCCTAGGATATCAACACCCATATACCACTGGCGGGTGGTGACTGTCTCTATAAGCTTGGACGTAAAGAATATCCCAGCGAGTACGTATCCTTCATGAGGGAAAATCTCCTTCCCTCCAAGATAATCAACAAAGTAGCTGATCAAGTAAGGACCGACATAGGACACAAGAGTATTCAACCCAGCAAATACGGCATTGCAAGCAGCTTCTTTCCAAAATGATTTCATAATTGCACGAGCTAAAGAAGGAGGCTTTGAAGGATTCTCGGACTTGCATCTCTTCCAATTCGACTTCAAGACCTTGTAACTTGATTTGGCTCTATCTCTTGGTGCAAGAAGCGGTATATCCTTAAGCTCAAGCGGTCTTTTTGAACCAGCCGAGAGAAGTGGATCCAACCATGAAAGCGTAATAAGGCTAACTAGCCCAGCAGTACTATATGGAGTAACTTTAAGACAAGCTGCCTCTTCTTCAACAAGCAAAGGCTCTTGAAGATCAGAGGAGCTTCTGGTAACTTGAATACCAGAAACGCCTCTCCAGGCCAGAAAGCAGAGAAACCCAAGAGCAGGTGTAACAGCTAAATTGGCGACAACATGAGAAGAACATCTGCTCCAACCTTCAATGGCTAGCCTTCTTCCATCGACATACATAGTACAGAGGCAAATCGAAAACGCCAGGAACCACCATATCCTCACCAAGAAGGGTAGCTTCTCTGAAGACTTGTATTTCAAATGAAGAACTAAGAAGCTAAGGACAAACCAAGCTAAACTCTGAGAAGCTGGAAAGCAAAGAACAAACCAGTCACTGACTTCTCTTCTAACCTTAACCCCATCATATACTAACACCAAAACTTGGACGCCTAACACATATAAGCAACAGAGCAAAGACAGATTAAACCCAAACCCAACACTAACATGGTTAACCTCTCTTTCCAAGCTAAGATTAGAAGCTGAAACCGTATCGTCCTTAGAGAGCCTATCTCTGCCTCTTCTCACGCAGACGAGAATCTGCCTCGCGGAGACAGCAAATAGAAAGACAAGAAAGAGTAGGAGGTTGATGATGACCGAACATAGTTCCAGTAGTGGCAAATGCTCTCGAAAGATCAACGAGATCTCAATAAAATCCATGATCGGGAAAGATTTGTGATAGAGAGTTTGTTTAAAATCAACAACCGGCGGATTGTTCGAGATAGAACAAGCATCTCACCACATCCCAAAGCTCGTAG