ncRNA ID | novel_bra_miR113 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:12974686-12974839 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485288 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUAUAGAGGCAUUCAUUGGAGC - 22 |
Stem-loop(if miRNA) |
--       U                      C     A              A  --    -   A    C       A   UCCAAUG AUGCCUCUAUAAUAGAGUUCCU UAUUU UAGGGGAAAAUAUA AG  AUCU GCU UUUU AUCUCUA A   ||||||| |||||||||||||||||||||| ||||| |||||||||||||| ||  |||| ||| |||| |||||||   AGGUUAC UACGGAGAUAUUAUCUCAAGGA AUAAA AUCUCCUUUUAUAU UC  UAGA UGA AAAA UGGAGAU U CG       U                      U     -              C  CU    A   -    -       A |
Stem-loop sequence | UCCAAUGUAUGCCUCUAUAAUAGAGUUCCUCUAUUUAUAGGGGAAAAUAUAAAGAUCUGCUAUUUUCAUCUCUAAAUAUAGAGGUAAAAAGUAAGAUUCCUCUAUAUUUUCCUCUAAAAUAUAGGAACUCUAUUAUAGAGGCAUUCAUUGGAGC |