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BaseInfo

ncRNA ID	novel_bra_miR109
Species	Brassica rapa
Class	miRNA
Genome position	ChrA6:552549-552630 [-]
Reference genome	Brapa_1.0
Source	SRR1485286;SRR1161445;SRR2912891;SRR2912894;SRR1485268;SRR1160826
Length	21
Mature sequence(if miRNA)	1 - GCAAGUUGACUUUGGCUCUGU - 21
Stem-loop(if miRNA)	--U         A          ACUAUACCA      C   UG    GAGCCAAAG UGACUUGUCG         ACCAAU UCA  A    ||||||||| ||||||||||         |||||| |||    CUCGGUUUC GUUGAACGGC         UGGUUA AGU  A UGU         A          ------CAG      U   CA
Stem-loop sequence	UGAGCCAAAGAUGACUUGUCGACUAUACCAACCAAUCUCAUGAAACUGAUAUUGGUGACCGGCAAGUUGACUUUGGCUCUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009133210.2	ncRNA:21   UGUCUCGGUUUCAGUUGAACG   1   |*||||*||||*||||||||| targets:385   AAAGAGGCAAAUUCAACUUGC   405 Target Full Sequence	2.5	PREDICTED: Brassica rapa myb-related protein Hv1-like (LOC103856130), mRNA	myb-related protein Hv1-like(LOC103856130)	coding protein	psRNATarget
XM_009123336.2	ncRNA:21   UGUCUCGGUUUCAGUUGAACG   1   |*||||*||||*||||||||| targets:462   AAAGAGGCAAAUUCAACUUGC   482 Target Full Sequence	2.5	PREDICTED: Brassica rapa myb-related protein Hv1 (LOC103846421), mRNA	myb-related protein Hv1(LOC103846421)	coding protein	psRNATarget
XM_009127796.2	ncRNA:21   UGUCUCGGUUUCAGUUGAACG   1   |*||||*||||*||||||||| targets:622   AAAGAGGCAAAUUCAACUUGC   642 Target Full Sequence	2.5	PREDICTED: Brassica rapa transcription factor MYB34-like (LOC103850980), mRNA	transcription factor MYB34-like(LOC103850980)	coding protein	psRNATarget