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BaseInfo

ncRNA ID ath-miRf10722-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AGGCUGAUUGGUGCAGUCUG - NA
Stem-loop(if miRNA) U                          C       AAUGUC   CUUUAUACUUUUUU
 GGAAAGUCAAGGCUGAUUGGUGCAGU UGCGUCC      GAU              G
 |||||||||||||||||||||||||| |||||||      |||
 CCUUUCAGUUCCGACUAACCACGUCA ACGCAGG      CAA              A
A                          U       -----U   UUGAUUGCCUACGG
Stem-loop sequence UGGAAAGUCAAGGCUGAUUGGUGCAGUCUGCGUCCAAUGUCGAUCUUUAUACUUUUUUGAGGCAUCCGUUAGUUAACUGGACGCAUACUGCACCAAUCAGCCUUGACUUUCCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT000918.1
ncRNA:20   GUCUGACGUGGUUAGUCGGA   1
  |||||**|||||||||||||
targets:47   CAGACACCACCAAUCAGCCU   66

2.0 Arabidopsis thaliana clone C105235 unknown protein (At5g01640) mRNA, complete cds NA coding protein psRNATarget
AY090930.1
ncRNA:20   GUCUGACGUGGUUAGUCGGA   1
  |||||**|||||||||||||
targets:163   CAGACACCACCAAUCAGCCU   182

2.0 Arabidopsis thaliana At5g01640 mRNA sequence NA coding protein psRNATarget
NM_120242.3
ncRNA:20   GUCUGACGUGGUUAGUCGGA   1
  |||||**|||||||||||||
targets:256   CAGACACCACCAAUCAGCCU   275

2.0 Arabidopsis thaliana prenylated RAB acceptor 1.B5 (PRA1.B5), mRNA prenylated RAB acceptor 1.B5(PRA1.B5) coding protein psRNATarget