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BaseInfo

ncRNA ID ath_circ_000178
Species Arabidopsis thaliana
Class circRNA
Genome position 1:554472-554863[-]
Reference genome TAIR10
Source PlantcircBase
Method find_circ/NA
Type exonic
Splice junction sequence AATGAGAGCCAAGTATCTACAACAAGAGGCGCCTCTATCAACACCAGAGTTGCATTCTTGAAAATCTGATTCTTCTCTATTCACTAATCTTCTATTTCTTTGAAATTTTTGTTTTTAAAGAAAATTCATTACCTGATTGTGACTGCTGTTTCAATAAATCGAGATGGTTTTGAAGTTGTGGTGTATCCAGGTTTATACTC
Tissues leaf/root, leaf
Exon boundary Yes-Yes
Splicing signals AC-CT
circRNA sequence NA
Genomic sequence AATGAGAGCCAAGTATCTACAACAAGAGGCGCCTCTATCAACACCAGAGTTGCATTCTTGAAAATCTGATTCTTCTCTATTCACTAATCTTCTATTTCTTCTTCTTCTTCCATTTTCTCTTCTCATTATGTGTAAATTATCTCTGTTCATAAATTAAATTATTATTTTCATTAGTTTTGGATTATTGTTTATTATAAAAACTGGGGAAAAAGGAAGAGGAATCATTCAATAAGCTGGACTATGTTTTCAAAATCTATTTTTCATTCTAAATCTTCAAAGTTTAAACTAAACCTGAAATTTTTGTTTTTAAAGAAAATTCATTACCTGATTGTGACTGCTGTTTCAATAAATCGAGATGGTTTTGAAGTTGTGGTGTATCCAGGTTTATACTC