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BaseInfo

ncRNA ID	novel_bra_miR97
Species	Brassica rapa
Class	miRNA
Genome position	ChrA5:13734107-13734235 [+]
Reference genome	Brapa_1.0
Source	SRR1485286
Length	21
Mature sequence(if miRNA)	1 - CGGAAGUUAAGAAACUGUUUC - 21
Stem-loop(if miRNA)	--                                         CC                 UA   CGGAAGUUAAGAAACUGUUUCUUAACUUUUAACUAAAAGAA  AAGAACCGGUUCUUAAA  A   |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||  G   GCCUUCAAUUCUUUGAUAAAGAAUUGAAAAUUGAUUUUUUU  UUCUUGGCCAAGAAUUU  G UC                                         AA                 CA
Stem-loop sequence	CGGAAGUUAAGAAACUGUUUCUUAACUUUUAACUAAAAGAACCAAGAACCGGUUCUUAAAUAAGGACUUUAAGAACCGGUUCUUAAUUUUUUUAGUUAAAAGUUAAGAAAUAGUUUCUUAACUUCCGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009131757.2	ncRNA:21   CUUUGUCAAAGAAUUGAAGGC   1   *||||=||||||||||||||| targets:555   UAAACGGUUUCUUAACUUCCG   575 Target Full Sequence	1.0	PREDICTED: Brassica rapa uncharacterized LOC103854791 (LOC103854791), mRNA	uncharacterized LOC103854791(LOC103854791)	coding protein	psRNATarget
XM_009143133.2	ncRNA:21   CUUUGUCAAAGAAUUGAAGGC   1   |*||=||*||||||||||||* targets:58   GCAAUAGCUUCUUAACUUCCA   78 Target Full Sequence	3.0	PREDICTED: Brassica rapa protein REDUCED WALL ACETYLATION 3 (LOC103865335), mRNA	protein REDUCED WALL ACETYLATION 3(LOC103865335)	coding protein	psRNATarget