ncRNA ID | novel_bra_miR95 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA6:472763-472856 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1125021;SRR1161445;SRR2912891;SRR2912893;SRR1160826 |
Length | 21 |
Mature sequence(if miRNA) | 74 - UUGUGGAACCGUGUGAAUACC - 94 |
Stem-loop(if miRNA) |
--         U           G  UAA  AA C A      UC      UGUUCACAC GUUCCACAACG AG   CA  G C CCGGAA  GAGA   ||||||||| ||||||||||| ||   ||  | | ||||||  |||U   AUAAGUGUG CAAGGUGUUGU UC   GU  C G GGCCUU  UUCA CC         C           -  -UA  GA A A      -U    |
Stem-loop sequence | UGUUCACACUGUUCCACAACGGAGUAACAAAGCCACCGGAAUCGAGAUACUUUUUCCGGAGACAGUGAUCUUGUUGUGGAACCGUGUGAAUACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009149312.2 |
|
1.5 | PREDICTED: Brassica rapa GDSL esterase/lipase At1g54020-like (LOC103871089), mRNA | GDSL esterase/lipase At1g54020-like(LOC103871089) | coding protein | psRNATarget |