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BaseInfo

ncRNA ID novel_bra_miR95
Species Brassica rapa
Class miRNA
Genome position ChrA6:472763-472856 [+]
Reference genome Brapa_1.0
Source SRR1125021;SRR1161445;SRR2912891;SRR2912893;SRR1160826
Length 21
Mature sequence(if miRNA) 74 - UUGUGGAACCGUGUGAAUACC - 94
Stem-loop(if miRNA) --         U           G  UAA  AA C A      UC   
  UGUUCACAC GUUCCACAACG AG   CA  G C CCGGAA  GAGA
  ||||||||| ||||||||||| ||   ||  | | ||||||  |||U
  AUAAGUGUG CAAGGUGUUGU UC   GU  C G GGCCUU  UUCA
CC         C           -  -UA  GA A A      -U   
Stem-loop sequence UGUUCACACUGUUCCACAACGGAGUAACAAAGCCACCGGAAUCGAGAUACUUUUUCCGGAGACAGUGAUCUUGUUGUGGAACCGUGUGAAUACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009149312.2
ncRNA:21   CCAUAAGUGUGCCAAGGUGUU   1
  *||||||||||*|||||||||
targets:99   UGUAUUCACACUGUUCCACAA   119

1.5 PREDICTED: Brassica rapa GDSL esterase/lipase At1g54020-like (LOC103871089), mRNA GDSL esterase/lipase At1g54020-like(LOC103871089) coding protein psRNATarget