Search result

BaseInfo

ncRNA ID ath_circ_000116
Species Arabidopsis thaliana
Class circRNA
Genome position 1:382371-383131[+]
Reference genome TAIR10
Source PlantcircBase
Method CIRI
Type intronic
Splice junction sequence AGGCCGTAATTTCTGAAGTTCCTGAAATCATCCTCAGATGTATAAGCAGAGATGAAGCCGCTTTTGCTGTCGCTCAAAAAGCTTTCAAGGCTCTTTACGAACCGCAACTGACTTTGCTATTTCTCTACTCCAATCCTTGGTCACTGAGGAGTCGAGTGTCATTTCAGAGCTCCACAGTCTTGTTGATGCGCTGGCAAAGG
Tissues NA
Exon boundary No-No
Splicing signals TC-TT
circRNA sequence NA
Genomic sequence AGGCCGTAATTTCTGAAGTTCCTGAAATCATCCTCAGATGTATAAGCAGAGATGAAGCCGCTTTTGCTGTCGCTCAAAAAGCTTTCAAGGCTCTTTACGAGAATGCATCAAGTAACCTTCACGTCAGTGCTAACCTAGCAATACTTGTTGCTATCCGTGATGTTTGCAAGCGTGTTGTTAAAGAGCTCACTAGTTGGGTATGTTTACAACCTTTTCAAGATTTCACTTCGCTGATGTGCTTTGTTCAGTTACTTCTCCATTAATTTGTCACTATTTCTGTCAGAACACATAGGATAACACATATCATATAAGTGCTAGGTCGAGTCTGTTTCCTGTAGTTGGAGCCTATCCTCAACTGGTTATAGATACTAGATTTGTTTCTTTGGTATTTTTAGTTATAATTAATTATCTTTCTTCAAACTTTTGACACAGGTGATTTATTCAGAGGAGGATCGGAAGCTCAACAAAGATATTACTATTGGTCTTATCCAGCGTGAGTTGCTTAGCCTAGCGGAGTACAATGTCCACATGGCGAAGCATCTTGATGGAGGGAGAAACAGTATGCTGAATTGCTTAACCTTTGTTGATGTCCTTGTGTGGTAACATTCTTTTTTTGTTTTGGCTAGTGAACTTGTTTTAACAAGTTGTTTGTTACGCAGAGACCGCAACTGACTTTGCTATTTCTCTACTCCAATCCTTGGTCACTGAGGAGTCGAGTGTCATTTCAGAGCTCCACAGTCTTGTTGATGCGCTGGCAAAGG