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BaseInfo

ncRNA ID novel_bra_miR85
Species Brassica rapa
Class miRNA
Genome position ChrA2:22317160-22317307 [+]
Reference genome Brapa_1.0
Source SRR1485286;SRR1485288;SRR1485289;SRR1592475;SRR1592476;SRR1592477;SRR1592478;SRR1776796;SRR1776877;SRR1776880;SRR1776899;SRR1777714;SRR2912891;SRR2912893;SRR1485268
Length 19
Mature sequence(if miRNA) 130 - GGCAGUCUCCUUGGCUAUC - 148
Stem-loop(if miRNA) --          U    U     -CU  U  UC   UC  -U        UUUAUGU                      C
  UAGCCAAGGA GACU GCCUG   CU UU  ACC  CA  GAUUCAAU       AGGGUUUUGGAUUACUAUGCUU U
  |||||||||| |||| |||||   || ||  |||  ||  ||||||||       |||||||||||||||||||||| A
  AUCGGUUCCU CUGA CGGAC   GG AA  UGG  GU  CUAAGUUG       UUCUAAAACUUAAUGAUAUGAG A
CU          -    -     UUU  C  --   GU  UU        -------                      A
Stem-loop sequence UAGCCAAGGAUGACUUGCCUGCUCUUUUUCACCUCCAUGAUUCAAUUUUAUGUAGGGUUUUGGAUUACUAUGCUUCUAAAGAGUAUAGUAAUUCAAAAUCUUGUUGAAUCUUUGUGGGUAACGGUUUCAGGCAGUCUCCUUGGCUAUC