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BaseInfo

ncRNA ID novel_bra_miR84
Species Brassica rapa
Class miRNA
Genome position ChrA2:21373530-21373671 [+]
Reference genome Brapa_1.0
Source SRR1485286
Length 24
Mature sequence(if miRNA) 119 - AGAGUGAACCAUUGGAGCAAAUCU - 142
Stem-loop(if miRNA) --                       --------         A            A    A           CAA
  AUUUGUUCCAAUGGUUCACUCUA        UAAUAGAGU AAAUAUAGAGUA UCUU UUUUUUUACUC   A
  |||||||||||||||||||||||        ||||||||| |||||||||||| |||| |||||||||||
  UAAACGAGGUUACCAAGUGAGAU        AUUAUUUCA UUUAUAUCUCAU AGAA AAAAAAAUGAG   U
UC                       AAUGAGAU         C            A    C           AUA
Stem-loop sequence AUUUGUUCCAAUGGUUCACUCUAUAAUAGAGUAAAAUAUAGAGUAAUCUUAUUUUUUUACUCCAAAUAUAGAGUAAAAAAACAAGAAUACUCUAUAUUUCACUUUAUUAUAGAGUAAUAGAGUGAACCAUUGGAGCAAAUCU