ncRNA ID | novel_bra_miR84 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA2:21373530-21373671 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485286 |
Length | 24 |
Mature sequence(if miRNA) | 119 - AGAGUGAACCAUUGGAGCAAAUCU - 142 |
Stem-loop(if miRNA) |
--                       --------         A            A    A           CAA   AUUUGUUCCAAUGGUUCACUCUA        UAAUAGAGU AAAUAUAGAGUA UCUU UUUUUUUACUC   A   |||||||||||||||||||||||        ||||||||| |||||||||||| |||| |||||||||||   UAAACGAGGUUACCAAGUGAGAU        AUUAUUUCA UUUAUAUCUCAU AGAA AAAAAAAUGAG   U UC                       AAUGAGAU         C            A    C           AUA |
Stem-loop sequence | AUUUGUUCCAAUGGUUCACUCUAUAAUAGAGUAAAAUAUAGAGUAAUCUUAUUUUUUUACUCCAAAUAUAGAGUAAAAAAACAAGAAUACUCUAUAUUUCACUUUAUUAUAGAGUAAUAGAGUGAACCAUUGGAGCAAAUCU |