ncRNA ID | novel_bra_miR80 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA2:18896234-18896314 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1160826 |
Length | 21 |
Mature sequence(if miRNA) | 61 - UUAUUCACAACUGCAUAAUUC - 81 |
Stem-loop(if miRNA) |
--AC      A       C     A    UU       AUA     UAUGCA UUGUGAA AAACA AAAA  CAUUACU   U     |||||| ||||||| ||||| ||||  |||||||     AUACGU AACACUU UUUGU UUUU  GUAAUGA   A CUUA      C       A     A    -U       CGU |
Stem-loop sequence | ACUAUGCAAUUGUGAACAAACAAAAAAUUCAUUACUAUAUAUGCAGUAAUGUUUUUAUGUUUAUUCACAACUGCAUAAUUC |