ncRNA ID | novel_bra_miR75 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:838752-838835 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485286 |
Length | 22 |
Mature sequence(if miRNA) | 1 - GCAAGUAGACUUUGGCUCUGUU - 22 |
Stem-loop(if miRNA) |
--UU         AUG          UU        GAUUAAU     GAGCCAAAG   ACUUGCCGAU  UACCGAUG       C     |||||||||   ||||||||||  ||||||||     CUCGGUUUC   UGAACGGCUG  AUGGUUAU       U UUGU         AGA          --        AGUCAAA |
Stem-loop sequence | UUGAGCCAAAGAUGACUUGCCGAUUUUACCGAUGGAUUAAUCUAAACUGAUAUUGGUAGUCGGCAAGUAGACUUUGGCUCUGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009131511.2 |
|
2.5 | PREDICTED: Brassica rapa probable 3-ketoacyl-CoA synthase 21 (LOC103854573), mRNA | probable 3-ketoacyl-CoA synthase 21(LOC103854573) | coding protein | psRNATarget |