ncRNA ID | novel_bra_miR74 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:1020038-1020127 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485286 |
Length | 23 |
Mature sequence(if miRNA) | 68 - AGAAAAUGCAGUCAUGAACAAAC - 90 |
Stem-loop(if miRNA) |
--                            AA  A       - UA   AGAAAAUGCAGUCAUGAACAAACAAAAA  AG UAUUACU C  U   ||||||||||||||||||||||||||||  || ||||||| |  A   UCUUUUACGUCAGUACUUGUUUGUUUUU  UC AUAAUGA G  U CA                            --  C       C UA |
Stem-loop sequence | AGAAAAUGCAGUCAUGAACAAACAAAAAAAAGAUAUUACUCUAUAUAUGCAGUAAUACCUUUUUUGUUUGUUCAUGACUGCAUUUUCUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009123686.2 |
|
2.5 | PREDICTED: Brassica rapa protein NRT1/ PTR FAMILY 1.3 (LOC103846707), mRNA | protein NRT1/ PTR FAMILY 1.3(LOC103846707) | coding protein | psRNATarget |