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BaseInfo

ncRNA ID novel_bra_miR74
Species Brassica rapa
Class miRNA
Genome position ChrA8:1020038-1020127 [-]
Reference genome Brapa_1.0
Source SRR1485286
Length 23
Mature sequence(if miRNA) 68 - AGAAAAUGCAGUCAUGAACAAAC - 90
Stem-loop(if miRNA) --                            AA  A       - UA
  AGAAAAUGCAGUCAUGAACAAACAAAAA  AG UAUUACU C  U
  ||||||||||||||||||||||||||||  || ||||||| |  A
  UCUUUUACGUCAGUACUUGUUUGUUUUU  UC AUAAUGA G  U
CA                            --  C       C UA
Stem-loop sequence AGAAAAUGCAGUCAUGAACAAACAAAAAAAAGAUAUUACUCUAUAUAUGCAGUAAUACCUUUUUUGUUUGUUCAUGACUGCAUUUUCUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009123686.2
ncRNA:23   CAAACAAGUACUGACGUAAAAGA   1
  *||*|*|||||||*|||||||||
targets:1600   AUUGGCUCAUGACAGCAUUUUCU   1622

2.5 PREDICTED: Brassica rapa protein NRT1/ PTR FAMILY 1.3 (LOC103846707), mRNA protein NRT1/ PTR FAMILY 1.3(LOC103846707) coding protein psRNATarget