ncRNA ID | novel_bra_miR63 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA7:2281469-2281529 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485286;SRR1485288;SRR1485289;SRR1125021;SRR1485262;SRR1485264;SRR1485265;SRR1485270;SRR1485275;SRR1485283 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACCGGAAGAGUGGCUCUGAUACCA - 24 |
Stem-loop(if miRNA) |
--             C   GAUACCACUUG   ACCGGAAGAGUGG UCU           A   ||||||||||||| |||           U   UGGCUUUCUCACU GGU           A AA             A   AUAAAACCAAG |
Stem-loop sequence | ACCGGAAGAGUGGCUCUGAUACCACUUGAUAGAACCAAAAUAUGGAUCACUCUUUCGGUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009126337.2 |
|
2.5 | PREDICTED: Brassica rapa wall-associated receptor kinase 5-like (LOC103849579), mRNA | wall-associated receptor kinase 5-like(LOC103849579) | coding protein | psRNATarget |