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BaseInfo

ncRNA ID novel_bra_miR63
Species Brassica rapa
Class miRNA
Genome position ChrA7:2281469-2281529 [+]
Reference genome Brapa_1.0
Source SRR1485286;SRR1485288;SRR1485289;SRR1125021;SRR1485262;SRR1485264;SRR1485265;SRR1485270;SRR1485275;SRR1485283
Length 24
Mature sequence(if miRNA) 1 - ACCGGAAGAGUGGCUCUGAUACCA - 24
Stem-loop(if miRNA) --             C   GAUACCACUUG
  ACCGGAAGAGUGG UCU           A
  ||||||||||||| |||           U
  UGGCUUUCUCACU GGU           A
AA             A   AUAAAACCAAG
Stem-loop sequence ACCGGAAGAGUGGCUCUGAUACCACUUGAUAGAACCAAAAUAUGGAUCACUCUUUCGGUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009126337.2
ncRNA:24   ACCAUAGUCUCGGUGAGAAGGCCA   1
  *|***||||||||||||||||*|*
targets:1356   CGUCUUCAGAGCCACUCUUCCAGA   1379

2.5 PREDICTED: Brassica rapa wall-associated receptor kinase 5-like (LOC103849579), mRNA wall-associated receptor kinase 5-like(LOC103849579) coding protein psRNATarget