ncRNA ID | novel_bra_miR57 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA7:10734274-10734369 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485286 |
Length | 24 |
Mature sequence(if miRNA) | 73 - AUUGAGAUAUAUAGCUGUAGACUA - 96 |
Stem-loop(if miRNA) |
--C        --       UG   ---------UU      AUUUUUUUGCU    UUUACAGU  UAUAUUU  AUU           GCAGAG           G    ||||||||  |||||||  |||           ||||||           U    AGAUGUCG  AUAUAGA  UAG           CGAAAG           G AUC        AU       GU   UUAGUUCGAAA      GAAUUUUUUGA |
Stem-loop sequence | CUUUACAGUUAUAUUUUGAUUUUGCAGAGAUUUUUUUGCUGUGAGUUUUUUAAGGAAAGCAAAGCUUGAUUGAUUGAGAUAUAUAGCUGUAGACUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009138362.2 |
|
3.0 | PREDICTED: Brassica rapa protein POLLENLESS 3-LIKE 2-like (LOC103860703), mRNA | protein POLLENLESS 3-LIKE 2-like(LOC103860703) | coding protein | psRNATarget |