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BaseInfo

ncRNA ID	ath-miRf10717-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - UCUCCGACGAGACUCCGAGAAA - NA
Stem-loop(if miRNA)	--   - GAUC        GAGA              -  GAUGAAA     AGGG   CUC C    UCUCCGAC    CUCCGAGAAACUUG CU       CUCCA    C   ||| |    ||||||||    |||||||||||||| ||       |||||   GAG G    AGAGGCUG    GAGGCUCUUUGGGU GA       GAGGU    A GA   A --AA        -GAG              A  -GAGGAG     AAAA
Stem-loop sequence	CUCCGAUCUCUCCGACGAGACUCCGAGAAACUUGCUGAUGAAACUCCAAGGGCAAAAAUGGAGGAGGAGAGAUGGGUUUCUCGGAGGAGGUCGGAGAAAGAGAGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_126690.7	ncRNA:22   AAAGAGCCUCAGAGCAGCCUCU   1   |||||||||||||||||||||| targets:276   UUUCUCGGAGUCUCGUCGGAGA   297 Target Full Sequence	0.0	Arabidopsis thaliana Protein kinase superfamily protein mRNA	Protein kinase superfamily protein(AT2G07180)	coding protein	psRNATarget
AY080806.1	ncRNA:22   AAAGAGCCUCAGAGCAGCCUCU   1   |||||||||||||||||||||| targets:73   UUUCUCGGAGUCUCGUCGGAGA   94 Target Full Sequence	0.0	Arabidopsis thaliana putative protein kinase (At2g07180) mRNA, complete cds	NA	coding protein	psRNATarget
BX819239.1	ncRNA:22   AAAGAGCCUCAGAGCAGCCUCU   1   |||||||||||||||||||||| targets:47   UUUCUCGGAGUCUCGUCGGAGA   68 Target Full Sequence	0.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AK226810.1	ncRNA:22   AAAGAGCCUCAGAGCAGCCUCU   1   |||||||||||||||||||||| targets:112   UUUCUCGGAGUCUCGUCGGAGA   133 Target Full Sequence	0.0	Arabidopsis thaliana mRNA for putative protein kinase, complete cds, clone: RAFL07-93-N08	NA	coding protein	psRNATarget
DQ132695.1	ncRNA:22   AAAGAGCCUCAGAGCAGCCUCU   1   ||*||||||*|||||||||||| targets:1063   UUACUCGGAUUCUCGUCGGAGA   1084 Target Full Sequence	1.5	Arabidopsis thaliana clone 01352 hypothetical protein (At3g46990) mRNA, complete cds	NA	coding protein	psRNATarget
NM_114566.2	ncRNA:22   AAAGAGCCUCAGAGCAGCCUCU   1   ||*||||||*|||||||||||| targets:1063   UUACUCGGAUUCUCGUCGGAGA   1084 Target Full Sequence	1.5	Arabidopsis thaliana DUF740 family protein, putative (DUF740) mRNA	DUF740 family protein, putative (DUF740)(AT3G46990)	coding protein	psRNATarget
NM_118518.3	ncRNA:22   AAAGAGCCUCAGAGCAGCCUCU   1   ******|||||||||||||||| targets:618   AGAGGAGGAGUCUCGUCGGAGA   639 Target Full Sequence	3.0	Arabidopsis thaliana hypothetical protein mRNA	hypothetical protein(AT4G23870)	coding protein	psRNATarget
AY054538.1	ncRNA:22   AAAGAGCCUCAGAGCAGCCUCU   1   ******|||||||||||||||| targets:446   AGAGGAGGAGUCUCGUCGGAGA   467 Target Full Sequence	3.0	Arabidopsis thaliana putative protein (At4g23870; T32A16.40) mRNA, complete cds	NA	coding protein	psRNATarget
BX829007.1	ncRNA:22   AAAGAGCCUCAGAGCAGCCUCU   1   ******|||||||||||||||| targets:433   AGAGGAGGAGUCUCGUCGGAGA   454 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL5ZA01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BT002180.1	ncRNA:22   AAAGAGCCUCAGAGCAGCCUCU   1   ******|||||||||||||||| targets:267   AGAGGAGGAGUCUCGUCGGAGA   288 Target Full Sequence	3.0	Arabidopsis thaliana putative protein (At4g23870) mRNA, complete cds	NA	coding protein	psRNATarget