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BaseInfo

ncRNA ID novel_bra_miR54
Species Brassica rapa
Class miRNA
Genome position ChrA1:9652360-9652443 [-]
Reference genome Brapa_1.0
Source SRR1160826
Length 22
Mature sequence(if miRNA) 1 - UUGAAGAAACGUGGGAGAACAC - 22
Stem-loop(if miRNA) --  G    A   A             ---     ----A    U
  GU CUUC AUG UUCUUCAAAGUUU   UGUGU     AACA G
  || |||| ||| |||||||||||||   |||||     |||| A
  CA GAGG UGC AAGAAGUUUCAAA   GCGUA     UUGU G
CA  A    G   A             UAU     GUUAG    C
Stem-loop sequence GUGCUUCAAUGAUUCUUCAAAGUUUUGUGUAAACAUGAGCUGUUGAUUGAUGCGUAUAAACUUUGAAGAAACGUGGGAGAACAC