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BaseInfo

ncRNA ID	novel_bra_miR52
Species	Brassica rapa
Class	miRNA
Genome position	ChrA6:546846-546915 [-]
Reference genome	Brapa_1.0
Source	SRR1485285
Length	19
Mature sequence(if miRNA)	1 - GCAAGUUGACUUUGGCUCU - 19
Stem-loop(if miRNA)	--        AG         ---A  AAG     UA   AGCCAAAG  GACUUGCCG    CC   GAAUC  A   ||||||||  |||||||||    ||   |||||  A   UCGGUUUC  UUGAACGGC    GG   UUUAG  C UC        AG         CAAC  --G     UC
Stem-loop sequence	AGCCAAAGAGGACUUGCCGACCAAGGAAUCUAAACCUGAUUUGGGCAACCGGCAAGUUGACUUUGGCUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009133210.2	ncRNA:19   UCUCGGUUUCAGUUGAACG   1   ||||*||||*||||||||| targets:387   AGAGGCAAAUUCAACUUGC   405 Target Full Sequence	2.5	PREDICTED: Brassica rapa myb-related protein Hv1-like (LOC103856130), mRNA	myb-related protein Hv1-like(LOC103856130)	coding protein	psRNATarget
XM_009123336.2	ncRNA:19   UCUCGGUUUCAGUUGAACG   1   ||||*||||*||||||||| targets:464   AGAGGCAAAUUCAACUUGC   482 Target Full Sequence	2.5	PREDICTED: Brassica rapa myb-related protein Hv1 (LOC103846421), mRNA	myb-related protein Hv1(LOC103846421)	coding protein	psRNATarget
XM_009127796.2	ncRNA:19   UCUCGGUUUCAGUUGAACG   1   ||||*||||*||||||||| targets:624   AGAGGCAAAUUCAACUUGC   642 Target Full Sequence	2.5	PREDICTED: Brassica rapa transcription factor MYB34-like (LOC103850980), mRNA	transcription factor MYB34-like(LOC103850980)	coding protein	psRNATarget