ncRNA ID | novel_bra_miR49 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA10:7001498-7001669 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485285 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAGAAAUAUAGAACAAAAACAUU - 24 |
Stem-loop(if miRNA) |
--         U        AAC             GAUCC  C   --U         GAAAACAAGAAGA  GAAUAGGAAAUGAACGUA   AGAGAAAUA AGAACAAA   AUUUUUUGUUAAG     GA UGG   GACCAUUCU             AC                  G   ||||||||| ||||||||   |||||||||||||     || |||   |||||||||             ||   UCUCUUUAU UCUUGUUU   UAAGGAACAAUUU     CU ACC   UUGGUAAGG             GU                  A CA         U        AAU             AUACC  -   UUG         ---------AAAA  AAGGACGUUAAGAUAAGG |
Stem-loop sequence | AGAGAAAUAUAGAACAAAAACAUUUUUUGUUAAGGAUCCGACUGGUGACCAUUCUGAAAACAAGAAGAACGAAUAGGAAAUGAACGUAGAGGAAUAGAAUUGCAGGAAUGAAAAGGAAUGGUUGUUCCAUCCCAUAUUUAACAAGGAAUUAAUUUGUUCUUUAUUUCUCUAC |