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BaseInfo

ncRNA ID	ath-miRf10716-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - CUCGACCAGGGGGUCGAGUGGUCU - NA
Stem-loop(if miRNA)	-UU          AGGG          -   A  GAG GUC   CUACUCGACC    GGUCGAGUGG UCU UU   G |||   ||||||||||    |||||||||| ||| || UAG   GGUGAGCUGG    CCAGCUCAUC AGG AG   U    UUU          GAAA          U   A  UGU
Stem-loop sequence	GUCUUCUACUCGACCAGGGGGUCGAGUGGUCUAUUGAGGUUGUGAAGGAUCUACUCGACCAAAGGGUCGAGUGGUUUGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183042.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   |||=|||||||||||||||||||| targets:1568   AGAUCACUCGACCCCCUGGUCGAG   1591 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   |*|||||||||||||||||||||| targets:87   ACACCACUCGACCCCCUGGUCGAG   110 Target Full Sequence	0.0	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   |*|||||||||||||||||||||| targets:121   AAACCACUCGACCCCCUGGUCGAG   144 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   |*|||||||||||||||||||||| targets:496   AAACCACUCGACCCCCUGGUCGAG   519 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   |*|||||||||||||||||||||| targets:496   AAACCACUCGACCCCCUGGUCGAG   519 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   |*=||||||||||||||||||||| targets:227   ACGCCACUCGACCCCCUGGUCGAG   250 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   ***|=||||||||||||||||||| targets:178   CAUCUACUCGACCCCCUGGUCGAG   201 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   |*=||||||||||||||||||||| targets:227   ACGCCACUCGACCCCCUGGUCGAG   250 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   ***|=||||||||||||||||||| targets:178   CAUCUACUCGACCCCCUGGUCGAG   201 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   |*|==||*|||||||||||||||| targets:580   ACAUUACYCGACCCCCUGGUCGAG   603 Target Full Sequence	1.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   |*===||||*|||||||||||||| targets:298   AUGUUACUCAACCCCCUGGUCGAG   321 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   |*===||||*|||||||||||||| targets:298   AUGUUACUCAACCCCCUGGUCGAG   321 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   |||||||||||||||*|||||||| targets:486   AGACCACUCGACCCCGUGGUCGAG   509 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
AY231407.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   **|||||||||||||*|||||||| targets:532   UCACCACUCGACCCCAUGGUCGAG   555 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   ||||||||||||||||*||||||| targets:1101   AGACCACUCGACCCCCAGGUCGAG   1124 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   |*|||||||||||||*|||||||| targets:1206   AAACCACUCGACCCCGUGGUCGAG   1229 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT025674.1	ncRNA:24   UCUGGUGAGCUGGGGGACCAGCUC   1   ***|=|||||||||||*||||||| targets:184   CAUCUACUCGACCCCCAGGUCGAG   207 Target Full Sequence	1.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
BT025674.1	ncRNA:24   UCUGG--UGAGCUGGGGGACCAGCUC   1   **|||--||||||||||||||||||| targets:303   CCACCUUACUCGACCCCCUGGUCGAG   328 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget