ncRNA ID | novel_bra_miR38 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA3:26341142-26341303 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485285;SRR1485281 |
Length | 24 |
Mature sequence(if miRNA) | 139 - AUAGAGGAACACAUUGGAGCAAAA - 162 |
Stem-loop(if miRNA) |
--UA             A                                          A                  AA     GCUCCGAUGUGUU CUCUAUAAUAGAGAAAUGCUAUAUUUGCCUCUAUAAAUAGAG AAUGCUAUUUUUUUCUCU  A     ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     CGAGGUUACACAA GAGAUAUUAUCUCUUUACGAUAUAAACGGAGAUAUUUAUCUC UUACGAUAAAAAAGGAGA  U AAAA             G                                          C                  CA |
Stem-loop sequence | UAGCUCCGAUGUGUUACUCUAUAAUAGAGAAAUGCUAUAUUUGCCUCUAUAAAUAGAGAAAUGCUAUUUUUUUCUCUAAAUACAGAGGAAAAAAUAGCAUUCCUCUAUUUAUAGAGGCAAAUAUAGCAUUUCUCUAUUAUAGAGGAACACAUUGGAGCAAAA |