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BaseInfo

ncRNA ID novel_bra_miR38
Species Brassica rapa
Class miRNA
Genome position ChrA3:26341142-26341303 [+]
Reference genome Brapa_1.0
Source SRR1485285;SRR1485281
Length 24
Mature sequence(if miRNA) 139 - AUAGAGGAACACAUUGGAGCAAAA - 162
Stem-loop(if miRNA) --UA             A                                          A                  AA
    GCUCCGAUGUGUU CUCUAUAAUAGAGAAAUGCUAUAUUUGCCUCUAUAAAUAGAG AAUGCUAUUUUUUUCUCU  A
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
    CGAGGUUACACAA GAGAUAUUAUCUCUUUACGAUAUAAACGGAGAUAUUUAUCUC UUACGAUAAAAAAGGAGA  U
AAAA             G                                          C                  CA
Stem-loop sequence UAGCUCCGAUGUGUUACUCUAUAAUAGAGAAAUGCUAUAUUUGCCUCUAUAAAUAGAGAAAUGCUAUUUUUUUCUCUAAAUACAGAGGAAAAAAUAGCAUUCCUCUAUUUAUAGAGGCAAAUAUAGCAUUUCUCUAUUAUAGAGGAACACAUUGGAGCAAAA