ncRNA ID | novel_bra_miR35 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA10:16197140-16197226 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485285;SRR1485286;SRR1485288;SRR1485289;SRR1592477;SRR1592478;SRR1776796;SRR1776877;SRR1161445;SRR1485258;SRR1777714;SRR2912891;SRR1485259;SRR2912893;SRR2912894;SRR1485260;SRR1485261;SRR1485262;SRR1485263;SRR1485264;SRR1125021;SRR1485270;SRR1160826;SRR1485275;SRR1485281 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCGAUAAACCUGUGCAUCCAG - 21 |
Stem-loop(if miRNA) |
--   G   GC    G        C  UG  --GGAAU     A   GGA GCA  GGUU AUCGAUCU UU  UG       UUUUG A   ||| |||  |||| |||||||| ||  ||       ||||| A   CCU CGU  CCAA UAGCUAGA AA  AC       AAAAC A GA   A   GU    A        C  GU  GAAAAUU     A |
Stem-loop sequence | GGAGGCAGCGGUUGAUCGAUCUCUUUGUGGGAAUUUUUGAAAAACAAAAUUAAAAGCAUGAACAGAUCGAUAAACCUGUGCAUCCAG |