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BaseInfo

ncRNA ID novel_bra_miR35
Species Brassica rapa
Class miRNA
Genome position ChrA10:16197140-16197226 [-]
Reference genome Brapa_1.0
Source SRR1485285;SRR1485286;SRR1485288;SRR1485289;SRR1592477;SRR1592478;SRR1776796;SRR1776877;SRR1161445;SRR1485258;SRR1777714;SRR2912891;SRR1485259;SRR2912893;SRR2912894;SRR1485260;SRR1485261;SRR1485262;SRR1485263;SRR1485264;SRR1125021;SRR1485270;SRR1160826;SRR1485275;SRR1485281
Length 21
Mature sequence(if miRNA) 1 - UCGAUAAACCUGUGCAUCCAG - 21
Stem-loop(if miRNA) --   G   GC    G        C  UG  --GGAAU     A
  GGA GCA  GGUU AUCGAUCU UU  UG       UUUUG A
  ||| |||  |||| |||||||| ||  ||       ||||| A
  CCU CGU  CCAA UAGCUAGA AA  AC       AAAAC A
GA   A   GU    A        C  GU  GAAAAUU     A
Stem-loop sequence GGAGGCAGCGGUUGAUCGAUCUCUUUGUGGGAAUUUUUGAAAAACAAAAUUAAAAGCAUGAACAGAUCGAUAAACCUGUGCAUCCAG