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BaseInfo

ncRNA ID ath-miR413
Species Arabidopsis thaliana
Class miRNA
Genome position chr1:23058034-23058156 [+]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 6 - AUAGUUUCUCUUGUUCUGCAC - 26
Stem-loop(if miRNA)    CC        UCUUG       CAU    UAA    AGGAACCAUG     G  --  AG
GAU  AUAGUUUC     UUCUGCA   CCAC   CUUC          UCCCA UU  UC  G
|||  ||||||||     |||||||   ||||   ||||          ||||| ||  ||
CUG  UAUCAAGG     AAGACGU   GGUG   GAAG          AGGGU AA  AG  U
   CU        --UCA       AUC    UUA    -GUAAACAAA     G  CU  AU
Stem-loop sequence GAUCCAUAGUUUCUCUUGUUCUGCACAUCCACUAACUUCAGGAACCAUGUCCCAGUUUCAGGUUAGAUCAAGUGGGAAAACAAAUGGAAGAUUGUGGCUAUGCAGAAACUGGAACUAUUCGUC

Reference

1 PMID:15345049
"Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets";
Wang XJ, Reyes JL, Chua NH, Gaasterland T;
Genome Biol. 5:R65(2004).
2 PMID:16669754
"MicroRNAS and their regulatory roles in plants";
Jones-Rhoades MW, Bartel DP, Bartel B;
Annu Rev Plant Biol. 57:19-53(2006).