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BaseInfo

ncRNA ID novel_bra_miR31
Species Brassica rapa
Class miRNA
Genome position ChrA1:12313101-12313152 [-]
Reference genome Brapa_1.0
Source SRR1485285
Length 24
Mature sequence(if miRNA) 29 - AUCCGGAUGACUUUUGAAAAUUUA - 52
Stem-loop(if miRNA) --AUCC     -     UG      UA
      GGAUG ACUUU  AAAAUU  G
      ||||| |||||  ||||||  G
      CUUAC UGAAA  UUUUAA  C
AGUCGA     C     --      UU
Stem-loop sequence AUCCGGAUGACUUUUGAAAAUUUAGGCUUAAUUUUAAAGUCCAUUCAGCUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_018657294.1
ncRNA:24   AUUUAAAAGUUUUCAGUAGGCCUA   1
  |**|||||*||||*||||||||||
targets:98   UUUAUUUUGAAAACUCAUCCGGAU   121

2.5 PREDICTED: Brassica rapa uncharacterized LOC103856887 (LOC103856887), mRNA NA coding protein psRNATarget