ncRNA ID | novel_bra_miR31 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA1:12313101-12313152 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485285 |
Length | 24 |
Mature sequence(if miRNA) | 29 - AUCCGGAUGACUUUUGAAAAUUUA - 52 |
Stem-loop(if miRNA) |
--AUCC     -     UG      UA       GGAUG ACUUU  AAAAUU  G       ||||| |||||  ||||||  G       CUUAC UGAAA  UUUUAA  C AGUCGA     C     --      UU |
Stem-loop sequence | AUCCGGAUGACUUUUGAAAAUUUAGGCUUAAUUUUAAAGUCCAUUCAGCUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_018657294.1 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC103856887 (LOC103856887), mRNA | NA | coding protein | psRNATarget |