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BaseInfo

ncRNA ID	novel_bra_miR27
Species	Brassica rapa
Class	miRNA
Genome position	ChrA9:33697013-33697146 [-]
Reference genome	Brapa_1.0
Source	SRR1485285;SRR1485286;SRR1485288;SRR1485289;SRR1485258;SRR1485259;SRR1485260;SRR1485261;SRR1485262;SRR1485263;SRR1485264;SRR1485265;SRR1485268;SRR1485269;SRR1485278;SRR1485279;SRR1485280;SRR1485281;SRR1485283;SRR1485284
Length	24
Mature sequence(if miRNA)	111 - AACGGAAUAUAAGAAACUGUCUCU - 134
Stem-loop(if miRNA)	--AAC                 C  U        -AACU              C            C      GGAAUAUAAGAAACUGU UC UAGUUUUU     AAAAAAGCUAAGAA CGGUUUUUAAGU U      ||||||||||||||||| || ||||||||     |||||||||||||| |||||||||||| C      CCUUAUAUUCUUUGGCA AG AUUAAAAA     UUUUUUUGAUUUUU GUCAAAAAUUUA U AAUCA                 A  U        AAAUU              A            U
Stem-loop sequence	AACGGAAUAUAAGAAACUGUCUCUUAGUUUUUAACUAAAAAAGCUAAGAACCGGUUUUUAAGUCUCUUAUUUAAAAACUGAUUUUUAGUUUUUUUUUAAAAAAAAUUAUGAAACGGUUUCUUAUAUUCCACUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009116547.2	ncRNA:24   UCUCUGUCAAAGAAUAUAAGGCAA   1   ****||||||||||||||||*||| targets:1439   CACCACAGUUUCUUAUAUUCGGUU   1462 Target Full Sequence	1.5	PREDICTED: Brassica rapa protein NRT1/ PTR FAMILY 4.4 (LOC103840062), mRNA	protein NRT1/ PTR FAMILY 4.4(LOC103840062)	coding protein	psRNATarget