ncRNA ID | novel_bra_miR26 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA9:5041958-5042078 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485285;SRR1485262;SRR1485266;SRR1485267;SRR1485269;SRR1485284 |
Length | 18 |
Mature sequence(if miRNA) | 104 - ACUCAUUGCCGGUUGACU - 121 |
Stem-loop(if miRNA) |
--        UG     GG  ---              GAU      AAGGU    AAAUA    U   UCAAUUGG  GUGAG  GA   GGUUCAUGAUUCCU   AUGGAG     GUCU     GGUC U   ||||||||  |||||  ||   ||||||||||||||   ||||||     ||||     ||||   AGUUGGCC  UACUC  CU   UCGAGUAUUGAGGG   UAUCUU     CAGA     UCAG C UC        GU     AA  UAU              ---      --AAU    ---AG    G |
Stem-loop sequence | UCAAUUGGUGGUGAGGGGAGGUUCAUGAUUCCUGAUAUGGAGAAGGUGUCUAAAUAGGUCUUCGGACUGAAGACUAAUUCUAUGGGAGUUAUGAGCUUAUUCAACUCAUUGCCGGUUGACU |