Search result

BaseInfo

ncRNA ID novel_bra_miR19
Species Brassica rapa
Class miRNA
Genome position ChrA8:13700906-13700959 [+]
Reference genome Brapa_1.0
Source SRR1485285;SRR1485258;SRR1485263
Length 24
Mature sequence(if miRNA) 31 - AUUAAGGACCCAAGACCAAGGACC - 54
Stem-loop(if miRNA) --            A           A
  UCCUUGGUCUUG GUCCUUAAUAU U
  |||||||||||| |||||||||||
  AGGAACCAGAAC CAGGAAUUAUG G
CC            C           U
Stem-loop sequence UCCUUGGUCUUGAGUCCUUAAUAUAUGUGUAUUAAGGACCCAAGACCAAGGACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009126850.2
ncRNA:24   CCAGGAACCAGAACCCAGGAAUUA   1
  ****||||||||||*||||||||*
targets:606   CCAGCUUGGUCUUGAGUCCUUAAC   629

2.5 PREDICTED: Brassica rapa UDP-sulfoquinovose synthase, chloroplastic (LOC103850131), mRNA UDP-sulfoquinovose synthase, chloroplastic(LOC103850131) coding protein psRNATarget