ncRNA ID | novel_bra_miR19 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:13700906-13700959 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485285;SRR1485258;SRR1485263 |
Length | 24 |
Mature sequence(if miRNA) | 31 - AUUAAGGACCCAAGACCAAGGACC - 54 |
Stem-loop(if miRNA) |
--            A           A   UCCUUGGUCUUG GUCCUUAAUAU U   |||||||||||| |||||||||||   AGGAACCAGAAC CAGGAAUUAUG G CC            C           U |
Stem-loop sequence | UCCUUGGUCUUGAGUCCUUAAUAUAUGUGUAUUAAGGACCCAAGACCAAGGACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009126850.2 |
|
2.5 | PREDICTED: Brassica rapa UDP-sulfoquinovose synthase, chloroplastic (LOC103850131), mRNA | UDP-sulfoquinovose synthase, chloroplastic(LOC103850131) | coding protein | psRNATarget |