| ncRNA ID | novel_bra_miR17 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA7:8969289-8969428 [+] |
| Reference genome | Brapa_1.0 |
| Source | SRR1485285 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - CUUAACGGAAUAUAAGAAACC - 21 |
| Stem-loop(if miRNA) |
-- A U A C -UA U A A CUUA CGGAAUAUAAGAAACCGUCUUUU ACUUUU A UAAAA GCUAAAAA C GCUCUUAAAU U |||| ||||||||||||||||||||||| |||||| | ||||| |||||||| | |||||||||| C GAAU GUCUUAUAUUCUUUGGCAGAAAA UGAAAA U AUUUU CGAUUUUU G CGAGGAUUUA U AA C U C U UCG C C G |
| Stem-loop sequence | CUUAACGGAAUAUAAGAAACCGUCUUUUUACUUUUAACUAAAAUAGCUAAAAAUCAGCUCUUAAAUAUCUGAUUUAGGAGCCGCUUUUUAGCGCUUUUUAUUCAAAAGUUAAAAGACGGUUUCUUAUAUUCUGCUAAGAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009152393.2 |
|
2.5 | PREDICTED: Brassica rapa putative U-box domain-containing protein 50 (LOC103873987), mRNA | putative U-box domain-containing protein 50(LOC103873987) | coding protein | psRNATarget |