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BaseInfo

ncRNA ID novel_bra_miR16
Species Brassica rapa
Class miRNA
Genome position ChrA7:17920619-17920780 [-]
Reference genome Brapa_1.0
Source SRR1485285;SRR1485286;SRR1485281
Length 24
Mature sequence(if miRNA) 1 - AUAGAGUGAACCAUUAGAGCAAAU - 24
Stem-loop(if miRNA) --          AA      A                                              A       C  CAA
  UUGCUUUAAU  UUCACU UAUAAUAGAGUUAUUCUAUAAUAGAGUGAAAUAUAGAGUAAUGUUG UUUUUUA UC   A
  ||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
  AACGAGAUUA  AAGUGA AUAUUAUCUCAAUGAGAUAUUAUCUCACUUUAUAUUUCAUUACAAU AAAAAAU AG   U
UA          CC      G                                              A       A  AUA
Stem-loop sequence UUGCUUUAAUAAUUCACUAUAUAAUAGAGUUAUUCUAUAAUAGAGUGAAAUAUAGAGUAAUGUUGAUUUUUUACUCCAAAUAUAGAAUAAAAAAAUAACAUUACUUUAUAUUUCACUCUAUUAUAGAGUAACUCUAUUAUAGAGUGAACCAUUAGAGCAAAU