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BaseInfo

ncRNA ID novel_bra_miR9
Species Brassica rapa
Class miRNA
Genome position ChrA7:6767586-6767747 [+]
Reference genome Brapa_1.0
Source SRR1485284;SRR1485286;SRR1485259;SRR1485279;SRR1485280
Length 24
Mature sequence(if miRNA) 139 - AUAGAGUGAACCAUUGAAGCAAAU - 162
Stem-loop(if miRNA) --                                              G            A  C             CAA
  UUGCUUCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGU AAAUAUAGAGUA UC UAUUUUUUUACUC   A
  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||
  AACGAAGUUACCAAGUGAGAUAUUAUCUCAAUGAGAUAUUAUCUCA UUUAUAUCUCAU AG AUAAAAAAGUGAG   U
UA                                              A            A  A             AUA
Stem-loop sequence UUGCUUCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAGUAAUCCUAUUUUUUUACUCCAAAUAUAGAGUGAAAAAAUAAGAAUACUCUAUAUUUAACUCUAUUAUAGAGUAACUCUAUUAUAGAGUGAACCAUUGAAGCAAAU