Search result

BaseInfo

ncRNA ID novel_bra_miR8
Species Brassica rapa
Class miRNA
Genome position ChrA7:3190193-3190321 [-]
Reference genome Brapa_1.0
Source SRR1485284;SRR1485278;SRR1485280;SRR1485283
Length 24
Mature sequence(if miRNA) 106 - GAUUCCGUCGUGACCAAUUUUGAC - 129
Stem-loop(if miRNA) --         G    -  AUU     ---  C   -A    -   CCCCA             AUGA  U
  GAUUCCGUC UGAC CA   UUGAC   CC AAC  GUUA GCC     GCUCGUUAGAACC    GC U
  ||||||||| |||| ||   |||||   || |||  |||| |||     |||||||||||||    || C
  UUAAGGCGG AUUG GU   GAUUG   GG UUG  CGGU CGG     UGAGCGAUCUUGG    CG U
AA         -    A  --G     AAC  A   AA    U   -----             AGUG  A
Stem-loop sequence GAUUCCGUCGUGACCAAUUUUGACCCCAACAGUUAGCCCCCCAGCUCGUUAGAACCAUGAGCUUCUAGCGUGAGGUUCUAGCGAGUGGCUUGGCAAGUUAGGCAAGUUAGGUGAGUUAGGCGGAAUUAA