ncRNA ID | novel_bra_miR7 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA7:6767581-6767742 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1485284;SRR1485285;SRR1485286;SRR1485279;SRR1485280 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAGAGUGAACCAUUGAAGCAAAU - 24 |
Stem-loop(if miRNA) |
--                                              U            U           C      U   UUGCUUCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGU AAAUAUAGAGUA UCUUAUUUUUU ACUCUA A   |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||   AACGAAGUUACCAAGUGAGAUAUUAUCUCAAUGAGAUAUUAUCUCA UUUAUAUCUCAU AGGAUAAAAAA UGAGGU U UA                                              C            U           A      U |
Stem-loop sequence | UUGCUUCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUUAAAUAUAGAGUAUUCUUAUUUUUUCACUCUAUAUUUGGAGUAAAAAAAUAGGAUUACUCUAUAUUUCACUCUAUUAUAGAGUAACUCUAUUAUAGAGUGAACCAUUGAAGCAAAU |