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BaseInfo

ncRNA ID novel_bra_miR5
Species Brassica rapa
Class miRNA
Genome position ChrA10:3216981-3217111 [+]
Reference genome Brapa_1.0
Source SRR1485284
Length 24
Mature sequence(if miRNA) 1 - UUACAAUUCAGUCGUCCGUCAGAC - 24
Stem-loop(if miRNA) --   C                A   A      U             G     ----AC      UG
  UUA AAUUCAGUCGUCCGUC GAC ACUUAC UGUAAGUCGUUCA GAUUU      GAGGUU  A
  ||| |||||||||||||||| ||| |||||| ||||||||||||| |||||      ||||||  C
  AAU UUAAGUCAGUAGGCGG CUG UGAAUG AUAUUCAGUAGGU UUAAA      CUCUAA  C
UG   A                G   C      U             A     AUAAGA      CA
Stem-loop sequence UUACAAUUCAGUCGUCCGUCAGACAACUUACUUGUAAGUCGUUCAGGAUUUACGAGGUUUGACCACAAUCUCAGAAUAAAAUUAUGGAUGACUUAUAUGUAAGUCGUCGGGCGGAUGACUGAAUUAUAAGU