ncRNA ID | novel_bra_miR5 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA10:3216981-3217111 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1485284 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUACAAUUCAGUCGUCCGUCAGAC - 24 |
Stem-loop(if miRNA) |
--   C                A   A      U             G     ----AC      UG   UUA AAUUCAGUCGUCCGUC GAC ACUUAC UGUAAGUCGUUCA GAUUU      GAGGUU  A   ||| |||||||||||||||| ||| |||||| ||||||||||||| |||||      ||||||  C   AAU UUAAGUCAGUAGGCGG CUG UGAAUG AUAUUCAGUAGGU UUAAA      CUCUAA  C UG   A                G   C      U             A     AUAAGA      CA |
Stem-loop sequence | UUACAAUUCAGUCGUCCGUCAGACAACUUACUUGUAAGUCGUUCAGGAUUUACGAGGUUUGACCACAAUCUCAGAAUAAAAUUAUGGAUGACUUAUAUGUAAGUCGUCGGGCGGAUGACUGAAUUAUAAGU |