ncRNA ID | novel_bra_miR3 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA9:30943807-30943878 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1160826 |
Length | 24 |
Mature sequence(if miRNA) | 49 - GAGUGAUGAACAAAAAAUAAAAGC - 72 |
Stem-loop(if miRNA) |
--                       C  U      U   GAGUGAUGAACAAAAAAUAAAAG AU ACUCUA A   ||||||||||||||||||||||| || ||||||   CUCAUUACUUGUUUUUUAUUUUU UA UGAGGU A AC                       C  U      A |
Stem-loop sequence | GAGUGAUGAACAAAAAAUAAAAGCAUUACUCUAUAAAUGGAGUUAUCUUUUUAUUUUUUGUUCAUUACUCCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009142834.2 |
|
2.5 | PREDICTED: Brassica rapa probable WRKY transcription factor 21 (LOC103865057), mRNA | probable WRKY transcription factor 21(LOC103865057) | coding protein | psRNATarget |