ncRNA ID | novel_bra_miR1 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA10:4451688-4451770 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1125021;SRR1592475;SRR1592477;SRR1592478;SRR1776796;SRR1776877;SRR1776880;SRR1161445;SRR1776889;SRR1776899;SRR1485259;SRR1777714;SRR2912893;SRR2912894;SRR1485261;SRR1485276;SRR1485281;SRR1160826 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUGUGCAAGACUAAGAAGCA - 20 |
Stem-loop(if miRNA) |
--          CU      C           --GUG    U   UUGUGCAAGA  AAGAAG AAAGCAUGUUU     UAUA C   ||||||||||  |||||| |||||||||||     |||| A   AACACGUUCU  UUCUUC UUUCGUACAGA     AUGU U CC          UC      U           AUAUA    U |
Stem-loop sequence | UUGUGCAAGACUAAGAAGCAAAGCAUGUUUGUGUAUAUCAUUUGUAAUAUAAGACAUGCUUUUCUUCUUCUUCUUGCACAACC |