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BaseInfo

ncRNA ID novel_bra_miR1
Species Brassica rapa
Class miRNA
Genome position ChrA10:4451688-4451770 [+]
Reference genome Brapa_1.0
Source SRR1125021;SRR1592475;SRR1592477;SRR1592478;SRR1776796;SRR1776877;SRR1776880;SRR1161445;SRR1776889;SRR1776899;SRR1485259;SRR1777714;SRR2912893;SRR2912894;SRR1485261;SRR1485276;SRR1485281;SRR1160826
Length 20
Mature sequence(if miRNA) 1 - UUGUGCAAGACUAAGAAGCA - 20
Stem-loop(if miRNA) --          CU      C           --GUG    U
  UUGUGCAAGA  AAGAAG AAAGCAUGUUU     UAUA C
  ||||||||||  |||||| |||||||||||     |||| A
  AACACGUUCU  UUCUUC UUUCGUACAGA     AUGU U
CC          UC      U           AUAUA    U
Stem-loop sequence UUGUGCAAGACUAAGAAGCAAAGCAUGUUUGUGUAUAUCAUUUGUAAUAUAAGACAUGCUUUUCUUCUUCUUCUUGCACAACC