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BaseInfo

ncRNA ID	novel_bol_miR264
Species	Brassica oleracea
Class	miRNA
Genome position	ChrC2:22451616-22451726 [-]
Reference genome	BOL
Source	SRR961924
Length	20
Mature sequence(if miRNA)	1 - GAAAGUGGUGGUUGAGGCUU - 20
Stem-loop(if miRNA)	--A   A     UU   -C  UC   U    --AU   GA       ACAC  C  UU    CCU GACCG  ACU  UA  UAA GCCU    GAU  GAAGCUC    UA UC  A    ||| |||||  |||  ||  ||| ||||    |||  |||||||    || ||    GGA UUGGU  UGA  GU  AUU UGGA    CUG  UUUUGAG    AU AG  A UUC   G     GG   AA  UA   U    AGAU   --       GCAU  A  UU
Stem-loop sequence	ACCUAGACCGUUACUCUAUCUAAUGCCUAUGAUGAGAAGCUCACACUACUCUUAAUUGAAUAUACGGAGUUUUGUCUAGAAGGUUUUAAUUGAAAGUGGUGGUUGAGGCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013755333.1	ncRNA:20   UUCGGAGUUGGUGGUGAAAG   1   =||=*||||||||||||||| targets:991   GAGUAUCAACCACCACUUUC   1010 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea amino acid permease 1 (LOC106317524), transcript variant X2, mRNA	amino acid permease 1(LOC106317524)	coding protein	psRNATarget
XM_013780139.1	ncRNA:20   UUCGGAGUUGGUGGUGAAAG   1   =||=*||||||||||||||| targets:1018   GAGUAUCAACCACCACUUUC   1037 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea amino acid permease 1-like (LOC106341352), transcript variant X2, mRNA	amino acid permease 1-like(LOC106341352)	coding protein	psRNATarget
XM_013755332.1	ncRNA:20   UUCGGAGUUGGUGGUGAAAG   1   =||=*||||||||||||||| targets:991   GAGUAUCAACCACCACUUUC   1010 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea amino acid permease 1 (LOC106317524), transcript variant X1, mRNA	amino acid permease 1(LOC106317524)	coding protein	psRNATarget
XM_013780138.1	ncRNA:20   UUCGGAGUUGGUGGUGAAAG   1   =||=*||||||||||||||| targets:1022   GAGUAUCAACCACCACUUUC   1041 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea amino acid permease 1-like (LOC106341352), transcript variant X1, mRNA	amino acid permease 1-like(LOC106341352)	coding protein	psRNATarget
XM_013770287.1	ncRNA:20   UUCGGAGUUGGUGGUGAAAG   1   *||||*||=||||||||||| targets:1149   CAGCCACAGCCACCACUUUC   1168 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea squamosa promoter-binding-like protein 13A (LOC106331858), mRNA	squamosa promoter-binding-like protein 13A(LOC106331858)	coding protein	psRNATarget