ncRNA ID | novel_bol_miR260 |
Species | Brassica oleracea |
Class | miRNA |
Genome position | ChrC5:39108931-39109107 [-] |
Reference genome | BOL |
Source | SRR961924 |
Length | 25 |
Mature sequence(if miRNA) | 153 - AGGAUUUAGGGUUUAGGGUUUAGAA - 177 |
Stem-loop(if miRNA) |
--AGGA      G      G      A      G      G      G      G      G      G      G      G            UUUAGG UUUAGG UUUAGA UUUAAG UUUAGG UUUAGA UUUAGG UUUAAG UUUAGA UUUAGG UUUAGG UUUAGA       |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||| |||||A       AGAUUU GGAUUU GAAUUU AGAUUU GGAUUU GAAUUU AGAUUU GGAUUU GAAUUU AGAUUU GGAUUU GAAUUU AAUUUA      G      G      A      G      G      A      G      G      A      G      G      |
Stem-loop sequence | AGGAUUUAGGGUUUAGGGUUUAGAAUUUAAGGUUUAGGGUUUAGAGUUUAGGGUUUAAGGUUUAGAGUUUAGGGUUUAGGGUUUAGAAUUUAAGGUUUAGGGUUUAGAAUUUAAGGUUUAGGGUUUAGAAUUUAAGGUUUAGGGUUUAGAAUUUAAGGUUUAGGGUUUAGAAUUUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013763865.1 |
|
1.5 | PREDICTED: Brassica oleracea var. oleracea ethylene-responsive transcription factor ERF114-like (LOC106325815), mRNA | ethylene-responsive transcription factor ERF114-like(LOC106325815) | coding protein | psRNATarget |