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BaseInfo

ncRNA ID	novel_bol_miR257
Species	Brassica oleracea
Class	miRNA
Genome position	ChrC5:29963237-29963340 [+]
Reference genome	BOL
Source	SRR961924
Length	21
Mature sequence(if miRNA)	84 - UGAAUGUCUUUCUCUUCAUCA - 104
Stem-loop(if miRNA)	--        U   U         A  U     G      GUC     -  UUU   AUGGAGAG AAA GACAUUCAG UC GCAAA CUUAUG   CCCUA AC   G   |||||||| ||| ||||||||| || ||||| ||||||   ||||| ||   A   UACUUCUC UUU CUGUAAGUC AG UGUUU GAGUAU   GGGAU UG   A AC        -   -         C  U     -      -GU     A  UAA
Stem-loop sequence	AUGGAGAGUAAAUGACAUUCAGAUCUGCAAAGCUUAUGGUCCCCUAACUUUGAAAAUGUAUAGGGUGUAUGAGUUUGUUGACCUGAAUGUCUUUCUCUUCAUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013772219.1	ncRNA:21   ACUACUUCUCUUUCUGUAAGU   1   *|=|||||||||||||||||* targets:143   CGGUGAAGAGAAAGACAUUCU   163 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea BON1-associated protein 2-like (LOC106333819), mRNA	BON1-associated protein 2-like(LOC106333819)	coding protein	psRNATarget
XM_013779447.1	ncRNA:21   ACUACUUCUCUUUCUGUAAGU   1   *|=|||||||||||||||||* targets:193   CGGUGAAGAGAAAGACAUUCU   213 Target Full Sequence	2.0	PREDICTED: Brassica oleracea var. oleracea BON1-associated protein 2-like (LOC106340594), mRNA	BON1-associated protein 2-like(LOC106340594)	coding protein	psRNATarget
XM_013770959.1	ncRNA:21   ACUACUUCUCUUUCUGUAAGU   1   *||||||||||||*||||||* targets:812   GGAUGAAGAGAAACACAUUCC   832 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea rab3 GTPase-activating protein catalytic subunit-like (LOC106332494), transcript variant X3, mRNA	rab3 GTPase-activating protein catalytic subunit-like(LOC106332494)	coding protein	psRNATarget
XM_013770958.1	ncRNA:21   ACUACUUCUCUUUCUGUAAGU   1   *||||||||||||*||||||* targets:940   GGAUGAAGAGAAACACAUUCC   960 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea rab3 GTPase-activating protein catalytic subunit-like (LOC106332494), transcript variant X2, mRNA	rab3 GTPase-activating protein catalytic subunit-like(LOC106332494)	coding protein	psRNATarget
XM_013770957.1	ncRNA:21   ACUACUUCUCUUUCUGUAAGU   1   *||||||||||||*||||||* targets:943   GGAUGAAGAGAAACACAUUCC   963 Target Full Sequence	2.5	PREDICTED: Brassica oleracea var. oleracea rab3 GTPase-activating protein catalytic subunit-like (LOC106332494), transcript variant X1, mRNA	rab3 GTPase-activating protein catalytic subunit-like(LOC106332494)	coding protein	psRNATarget