Search result

BaseInfo

ncRNA ID novel_bol_miR246
Species Brassica oleracea
Class miRNA
Genome position ChrC2:40876151-40876226 [-]
Reference genome BOL
Source SRR961924
Length 25
Mature sequence(if miRNA) 52 - AGGAUUUCAUUUUCCGUCGGAAUGA - 76
Stem-loop(if miRNA) --    U     UU    U    --     U        A
  AGGA UUCAU  UCCG CGGA  AUGAA UCCUCGGG U
  |||| |||||  |||| ||||  ||||| ||||||||
  UCCU AAGUA  AGGC GCCU  UACUU AGGAGCCU A
GC    U     --    U    UU     U        U
Stem-loop sequence AGGAUUUCAUUUUCCGUCGGAAUGAAUUCCUCGGGAUAUUCCGAGGAUUUCAUUUUCCGUCGGAAUGAAUUCCUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013749714.1
ncRNA:25   AGUAAGGCUGCCUUUUACUUUAGGA   1
  *=||*=|||*||||||||||||||*
targets:62   GUAUAUCGAAGGAAAAUGAAAUCCA   86

2.0 PREDICTED: Brassica oleracea var. oleracea histone H4 (LOC106312263), mRNA histone H4(LOC106312263) coding protein psRNATarget